members:aguilloux:enseignements:survivalanalysis
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members:aguilloux:enseignements:survivalanalysis [2019/10/22 09:58] Agathe Guilloux [Longitudinal and survival data analysis (M2DSSAF et ENSIIE)] |
members:aguilloux:enseignements:survivalanalysis [2020/09/10 08:50] Agathe Guilloux |
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| == Transparents == | == Transparents == | ||
| * {{ members/aguilloux:enseignements:m2ds_surv:chapter1.pdf| Chapter 1 }} {{:members:aguilloux:enseignements:m2ds_surv:r_chapitre1.rmd.zip| R for Chapter 1}} | * {{ members/aguilloux:enseignements:m2ds_surv:chapter1.pdf| Chapter 1 }} {{:members:aguilloux:enseignements:m2ds_surv:r_chapitre1.rmd.zip| R for Chapter 1}} | ||
| - | * {{ members/aguilloux:enseignements:m2ds_surv:chapter2.pdf| Chapter 2 }} {{:members:aguilloux:enseignements:m2ds_surv:r_chapitre2.rmd.zip| R for Chapter 2}} | ||
| - | * {{ members/aguilloux:enseignements:m2ds_surv:chapter3.pdf| Chapter 3 }} {{:members:aguilloux:enseignements:m2ds_surv:r_chapitre3.rmd.zip| R for Chapter 3}} | ||
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| === Labs === | === Labs === | ||
| - | == Lab 1 == | ||
| - | * {{:members:aguilloux:enseignements:m2ds_surv:lab1_v2.pdf| Enoncé }} | ||
| - | * {{:members:aguilloux:enseignements:m2ds_surv:lab1.rmd.zip| Début de code}} | ||
| - | * {{:members:aguilloux:enseignements:m2ds_surv:data.zip| Data}} | ||
| - | == Lab 2 == | ||
| - | * {{:members:aguilloux:enseignements:m2ds_surv:entrainement.pdf| Enoncé }} | ||
| - | * Les données sont disponibles dans le package KMsurv | ||
| - | * {{:members:aguilloux:enseignements:m2ds_surv:lab2_correction.zip| Correction}} | ||
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| - | == Lab 3 == | ||
| - | * {{:members:aguilloux:enseignements:m2ds_surv:lab3.pdf| Enoncé}} | ||
| - | * {{:members:aguilloux:enseignements:m2ds_surv:lab3_corrected.rmd.zip| Correction}} | ||
| - | == Lab 4 == | ||
| - | * {{:members:aguilloux:enseignements:m2ds_surv:lab4_project.pdf| Enoncé}} | ||
| - | * [[https://docs.google.com/forms/d/1ciOUQoNZk9h4hcm0eZLm-ykjFHGNhkJNc2mPuaUSd54/edit?usp=sharing|Questionnaire google pour déclarer les équipes et uploader votre rapport]] | ||
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| - | wpbc = read_delim("./wpbc.data.txt",delim=",",col_names=F,na = '?') | ||
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| - | names_cov = paste0(rep(c('radius','texture','perimeter','area','smoothness','compactness', | ||
| - | 'concavity','concave points','symmetry','fractal dimension'),3), | ||
| - | c(rep('_mean',10),rep('_SD',10),rep('_worst',10))) | ||
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| - | names(wpbc) = c('id','recurrent','time',names_cov,c('Tumor size','Lymph node status')) | ||
| - | wpbc = wpbc %>% mutate(id = factor(id)) %>% | ||
| - | mutate( recurrent = recode_factor(recurrent , "N" = FALSE, 'R' = TRUE )) | ||
| - | glimpse(wpbc) | ||
members/aguilloux/enseignements/survivalanalysis.txt · Last modified: 2022/03/24 11:03 by Agathe Guilloux
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