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--- publications:logiciels [2015/09/07 13:34] – pneuvial
+++ publications:logiciels [2015/09/07 13:35] (current) – pneuvial
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 ===== Network Inference =====
-  * [[http://cran.r-project.org/web/packages/G1DBN/index.html|G1DBN]]\\
+  * [[http://cran.r-project.org/web/packages/G1DBN/index.html|G1DBN]]: R package for reconstruction of gene regulatory networks. G1DBN performs dynamic Bayesian network (DBN) inference using 1st order conditional dependencies.
-//Module R pour la reconstruction de réseaux génétiques : inférence d'un réseau bayésien dynamique à partir d'indépendence d'ordre 1.//\\
+  * [[:logiciels:simone|Simone]]
-R package for reconstruction of gene regulatory networks. G1DBN performs dynamic Bayesian network (DBN) inference using 1st order conditional dependencies.
-  * [[:logiciels:simone|Simone]]\\
-SIMoNe (Statistical Inference for MOdular NEtworks) is a R package which enables inference of gene-regulatory networks based on partial correlation coefficients from microarray experiments. Modelling gene expression data with a Gaussian Graphical Model, the algorithm estimates nonzero entries of the concentration matrix, in a sparse and possibly high-dimensional setting. Its originality lies in the fact that it searches for a latent modular structure to drive the inference procedure through adaptive penalization of the concentration matrix.
 ===== Sequence Analysis =====